import argparse
from .kraken import set_options as set_kraken_options
from .tngs import set_options as set_result_options


def main():
    parser = argparse.ArgumentParser(description="Clinical Pathogen")
    sub_parser = parser.add_subparsers()
    set_kraken_options(sub_parser)
    set_result_options(sub_parser)
    args = parser.parse_args()
    args.func(args)
